Genes-10-00194-g005-btm
Autor/Urheber:
Mike Dyall-Smith, Peter Palm, Gerhard Wanner, Angela Witte, Dieter Oesterhelt, Friedhelm Pfeiffer
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2826 x 1290 Pixel (570869 Bytes)
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Family Vertoviridae, (Caudoviricetes). Genome map of ChaoS9 compared to phiCh1 and phiH1.
(b) Genome map of phiCh1; (c) Genome map of ChaoS9; (d) Genome map of phiH1.
Scale bar at bottom shows length, in kbp. Pink shading between genome maps indicates regions of similarity (tBLASTx, ≥30 % amino acid identity). Functionally similar genes have been colored the same and are labeled nearby on one or more of the genomes. The colors, gene labels (and encoded proteins) are: red, terL (large subunit terminase); light green, por (portal protein); brown, capsid protein genes, such as mcp, gpE and hp32 (major capsid protein), hp20, hp67, cp67; yellow, tpm (tape measure protein); blue, bpj (baseplate J family protein); pink, tail fiber genes; light purple, par (plasmid partition); dark green, orc1, (replication protein Orc1); light blue, repH (plasmid replication protein); light grey, dcm5, yhdJ, ycdA, m.II, m.III, m.I (methyltransferases); dark grey, ISH12 transposase; black, integrases (int1, int2). Genes of unknown or uncertain function are uncolored (white).
(b) Genome map of phiCh1; (c) Genome map of ChaoS9; (d) Genome map of phiH1.
Scale bar at bottom shows length, in kbp. Pink shading between genome maps indicates regions of similarity (tBLASTx, ≥30 % amino acid identity). Functionally similar genes have been colored the same and are labeled nearby on one or more of the genomes. The colors, gene labels (and encoded proteins) are: red, terL (large subunit terminase); light green, por (portal protein); brown, capsid protein genes, such as mcp, gpE and hp32 (major capsid protein), hp20, hp67, cp67; yellow, tpm (tape measure protein); blue, bpj (baseplate J family protein); pink, tail fiber genes; light purple, par (plasmid partition); dark green, orc1, (replication protein Orc1); light blue, repH (plasmid replication protein); light grey, dcm5, yhdJ, ycdA, m.II, m.III, m.I (methyltransferases); dark grey, ISH12 transposase; black, integrases (int1, int2). Genes of unknown or uncertain function are uncolored (white).
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Credit:
Halobacterium salinarum virus ChaoS9, a Novel Halovirus Related to PhiH1 and PhiCh1. In: MDPI: Genes, volume 10, issue 3 (Special Issue Genetics of Halophilic Microorganisms), p.194; doi:10.3390/genes10030194
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